TRANSIT
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TRANSIT Manual

  • Overview
  • Installation
  • Running TRANSIT
  • Features
  • Analysis Methods
  • Console Mode Cheat-Sheet

TRANSIT Tutorials

  • Tutorial: Essentiality Analysis in a Single Condition
  • Tutorial: Essentiality Analysis of the Entire Genome
  • Tutorial: Comparative Analysis - Glycerol vs Cholesterol
  • Tutorial: Normalize datasets
  • Tutorial: Export datasets

TPP Manual

  • Overview
  • Installation
  • Running TPP
  • Overview of Data Processing Procedure
  • Statistics

Code Documentation

  • transit package
TRANSIT
  • Docs »
  • Overview: module code
  • Edit on GitHub

All modules for which code is available

  • functools
  • pytransit.analysis.base
  • pytransit.analysis.binomial
  • pytransit.analysis.example
  • pytransit.analysis.griffin
  • pytransit.analysis.gumbel
  • pytransit.analysis.hmm
  • pytransit.analysis.rankproduct
  • pytransit.analysis.resampling
  • pytransit.analysis.tn5gaps
  • pytransit.norm_tools
  • pytransit.stat_tools
  • pytransit.tnseq_tools
  • pytransit.transit_tools

© Copyright 2015, Michael A. DeJesus & Thomas R. Ioerger. Revision e314f415.

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